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Bug 1049 - statistics_montecarlo requires cfg.dim, but I cannot find information what dim should/can be
| Status | CLOSED FIXED |
| Reported | 2011-10-17 17:12:00 +0200 |
| Modified | 2015-02-16 09:34:10 +0100 |
| Product: | FieldTrip |
| Component: | documentation |
| Version: | unspecified |
| Hardware: | PC |
| Operating System: | Windows |
| Importance: | P1 normal |
| Assigned to: | Jan-Mathijs Schoffelen |
| URL: | |
| Tags: | |
| Depends on: | |
| Blocks: | |
| See also: |
Jörn M. Horschig - 2011-10-17 17:12:21 +0200
I am running sourcestatistics and never bothered about the dimensions in freqstatistics
Jan-Mathijs Schoffelen - 2011-10-20 14:38:05 +0200
good point. cfg.dim should in this case be the grid.dim when the source space is defined on a 3D regular grid. Are you using cfg.implementation = 'new' or 'old' for ft_sourcestatistics?
Jörn M. Horschig - 2011-10-20 15:21:46 +0200
whatever the default is ;) btw, I figured that with cfg.dim out (it is kinda obvious), but it should be documented somewhere
Jan-Mathijs Schoffelen - 2011-10-20 15:43:11 +0200
I agree. In the past it was added by statistics_wrapper, which was doing the data bookkeeping. It would make sense to add this behavior again to ft_sourcestatistics (implementation: 'old' (=default)). No need for the user to specify this. It is only needed in statistics_montecarlo to know how to reshape the data for the 3D-clustering
Boris Reuderink - 2011-11-17 10:46:33 +0100
Changed the status of bugs without a specific owner to UNCONFIRMED. I'll try to replicate these bugs (potentially involving the submitter), and change confirmed bugs to NEW. Boris
Boris Reuderink - 2011-12-07 11:35:50 +0100
Defect by developer, changed to confirmed.
Jan-Mathijs Schoffelen - 2011-12-07 13:34:39 +0100
generate test data that contain the different representations of source data: old vs new single subject vs multi subject pcc, dics, lcmv containing .avg .trial volumetric vs surface based
Jan-Mathijs Schoffelen - 2011-12-13 10:26:21 +0100
example data stored in /home/common/matlab/fieldtrip/data/test/source/meg/ as of revision 5027
Roemer van der Meij - 2012-04-12 14:13:48 +0200
The test script (test_bug1049) now fails, as the directory stuctures have changed for the test-data. Now, for some old fieldtrip-versions there are separate data-directories. Should this script loop over all old versions and test each one?