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Bug 2072 - nanmean.mexa64 crashes
| Status | CLOSED DUPLICATE |
| Reported | 2013-03-21 10:05:00 +0100 |
| Modified | 2019-08-10 12:03:25 +0200 |
| Product: | FieldTrip |
| Component: | core |
| Version: | unspecified |
| Hardware: | PC |
| Operating System: | Windows |
| Importance: | P3 normal |
| Assigned to: | |
| URL: | |
| Tags: | |
| Depends on: | |
| Blocks: | |
| See also: |
Eelke Spaak - 2013-03-21 10:05:38 +0100
Just got this error (at the same point in the code) twice in a row, causing Matlab to crash. I think it's due to nanmean.mexa64, judging from the stack trace. I was running matlab through torque interactive, by the way; don't know if that matters. The first crash was when the execution host was dccn-c011, the second crash was on execution host dccn-c005. MATLAB crash file:/home/electromag/eelspa/matlab_crash_dump.14571-1: ------------------------------------------------------------------------ Floating point exception detected at Thu Mar 21 10:02:23 2013 ------------------------------------------------------------------------ Configuration: Crash Decoding : Disabled Current Visual : 0x21 (class 4, depth 24) Default Encoding: ISO-8859-1 GNU C Library : 2.12 stable MATLAB Root : /opt/matlab2012a MATLAB Version : 7.14.0.739 (R2012a) Operating System: Linux 2.6.32-279.5.2.el6.x86_64 #1 SMP Fri Aug 24 01:07:11 UTC 2012 x86_64 Processor ID : x86 Family 6 Model 44 Stepping 2, GenuineIntel Virtual Machine : Java 1.6.0_17-b04 with Sun Microsystems Inc. Java HotSpot(TM) 64-Bit Server VM mixed mode Window System : The X.Org Foundation (11004000), display mentat001:61.0 Fault Count: 1 Abnormal termination: Floating point exception Register State (from fault): RAX = 0000000000000000 RBX = 0000000000000003 RCX = 0000000000000003 RDX = 0000000000000000 RSP = 00007fded95db640 RBP = 00007fded95db670 RSI = 0000000000000000 RDI = 0000000000000003 R8 = 0000000000000002 R9 = 0000000000000004 R10 = 0000000000000030 R11 = 0000003e44c828ec R12 = 00007fdd9613094c R13 = 0000000000000000 R14 = 0000000000000004 R15 = 00007fdd95faa7c0 RIP = 00007fdd9b69ea28 EFL = 0000000000010246 CS = 0033 FS = 0000 GS = 0000 Stack Trace (from fault): [ 0] 0x00007fdef1ac692e /opt/matlab2012a/bin/glnxa64/libmwfl.so+00370990 _ZN2fl4diag15stacktrace_base7captureERKNS0_14thread_contextEm+000158 [ 1] 0x00007fdef1ac97d0 /opt/matlab2012a/bin/glnxa64/libmwfl.so+00382928 [ 2] 0x00007fdef1ac9b3b /opt/matlab2012a/bin/glnxa64/libmwfl.so+00383803 _ZN2fl4diag13terminate_logEPKcRKNS0_14thread_contextE+000171 [ 3] 0x00007fdef09ab203 /opt/matlab2012a/bin/glnxa64/libmwmcr.so+01253891 _ZN2fl4diag13terminate_logEPKcPK8ucontext+000067 [ 4] 0x00007fdef09a80fd /opt/matlab2012a/bin/glnxa64/libmwmcr.so+01241341 [ 5] 0x00007fdef09a979d /opt/matlab2012a/bin/glnxa64/libmwmcr.so+01247133 [ 6] 0x00007fdef09a9925 /opt/matlab2012a/bin/glnxa64/libmwmcr.so+01247525 [ 7] 0x00007fdef09a9f01 /opt/matlab2012a/bin/glnxa64/libmwmcr.so+01249025 [ 8] 0x00007fdef09aa3f5 /opt/matlab2012a/bin/glnxa64/libmwmcr.so+01250293 [ 9] 0x0000003e4580f4a0 /lib64/libpthread.so.0+00062624 [ 10] 0x00007fdd9b69ea28 /home/electromag/eelspa/ft-src/utilities/private/nanmean.mexa64+00002600 [ 11] 0x00007fdd9b69f3df /home/electromag/eelspa/ft-src/utilities/private/nanmean.mexa64+00005087 mexFunction+000584 [ 12] 0x00007fdeeabcecca /opt/matlab2012a/bin/glnxa64/libmex.so+00109770 mexRunMexFile+000090 [ 13] 0x00007fdeeabcaf79 /opt/matlab2012a/bin/glnxa64/libmex.so+00094073 [ 14] 0x00007fdeeabcbde1 /opt/matlab2012a/bin/glnxa64/libmex.so+00097761 [ 15] 0x00007fdef0653063 /opt/matlab2012a/bin/glnxa64/libmwm_dispatcher.so+00479331 _ZN8Mfh_file11dispatch_fhEiPP11mxArray_tagiS2_+000515 [ 16] 0x00007fdef00ff386 /opt/matlab2012a/bin/glnxa64/libmwm_interpreter.so+03982214 [ 17] 0x00007fdef00ffb0a /opt/matlab2012a/bin/glnxa64/libmwm_interpreter.so+03984138 [ 18] 0x00007fdef010067a /opt/matlab2012a/bin/glnxa64/libmwm_interpreter.so+03987066 [ 19] 0x00007fdeeff6732d /opt/matlab2012a/bin/glnxa64/libmwm_interpreter.so+02310957 [ 20] 0x00007fdeeff92b82 /opt/matlab2012a/bin/glnxa64/libmwm_interpreter.so+02489218 [ 21] 0x00007fdeeff92caf /opt/matlab2012a/bin/glnxa64/libmwm_interpreter.so+02489519 [ 22] 0x00007fdef00acd70 /opt/matlab2012a/bin/glnxa64/libmwm_interpreter.so+03644784 [ 23] 0x00007fdeefece11c /opt/matlab2012a/bin/glnxa64/libmwm_interpreter.so+01683740 [ 24] 0x00007fdeefeca333 /opt/matlab2012a/bin/glnxa64/libmwm_interpreter.so+01667891 [ 25] 0x00007fdeefecb037 /opt/matlab2012a/bin/glnxa64/libmwm_interpreter.so+01671223 [ 26] 0x00007fdeeff34690 /opt/matlab2012a/bin/glnxa64/libmwm_interpreter.so+02102928 [ 27] 0x00007fdef0653063 /opt/matlab2012a/bin/glnxa64/libmwm_dispatcher.so+00479331 _ZN8Mfh_file11dispatch_fhEiPP11mxArray_tagiS2_+000515 [ 28] 0x00007fdeeff18476 /opt/matlab2012a/bin/glnxa64/libmwm_interpreter.so+01987702 [ 29] 0x00007fdeefec9426 /opt/matlab2012a/bin/glnxa64/libmwm_interpreter.so+01664038 [ 30] 0x00007fdeefecdbe4 /opt/matlab2012a/bin/glnxa64/libmwm_interpreter.so+01682404 [ 31] 0x00007fdeefeca333 /opt/matlab2012a/bin/glnxa64/libmwm_interpreter.so+01667891 [ 32] 0x00007fdeefecb037 /opt/matlab2012a/bin/glnxa64/libmwm_interpreter.so+01671223 [ 33] 0x00007fdeeff34690 /opt/matlab2012a/bin/glnxa64/libmwm_interpreter.so+02102928 [ 34] 0x00007fdef0653063 /opt/matlab2012a/bin/glnxa64/libmwm_dispatcher.so+00479331 _ZN8Mfh_file11dispatch_fhEiPP11mxArray_tagiS2_+000515 [ 35] 0x00007fdeeff18476 /opt/matlab2012a/bin/glnxa64/libmwm_interpreter.so+01987702 [ 36] 0x00007fdeefec9426 /opt/matlab2012a/bin/glnxa64/libmwm_interpreter.so+01664038 [ 37] 0x00007fdeefecdbe4 /opt/matlab2012a/bin/glnxa64/libmwm_interpreter.so+01682404 [ 38] 0x00007fdeefeca333 /opt/matlab2012a/bin/glnxa64/libmwm_interpreter.so+01667891 [ 39] 0x00007fdeefecb037 /opt/matlab2012a/bin/glnxa64/libmwm_interpreter.so+01671223 [ 40] 0x00007fdeeff34690 /opt/matlab2012a/bin/glnxa64/libmwm_interpreter.so+02102928 [ 41] 0x00007fdef0653063 /opt/matlab2012a/bin/glnxa64/libmwm_dispatcher.so+00479331 _ZN8Mfh_file11dispatch_fhEiPP11mxArray_tagiS2_+000515 [ 42] 0x00007fdeeff18476 /opt/matlab2012a/bin/glnxa64/libmwm_interpreter.so+01987702 [ 43] 0x00007fdeefec9426 /opt/matlab2012a/bin/glnxa64/libmwm_interpreter.so+01664038 [ 44] 0x00007fdeefecdbe4 /opt/matlab2012a/bin/glnxa64/libmwm_interpreter.so+01682404 [ 45] 0x00007fdeefeca333 /opt/matlab2012a/bin/glnxa64/libmwm_interpreter.so+01667891 [ 46] 0x00007fdeefecb037 /opt/matlab2012a/bin/glnxa64/libmwm_interpreter.so+01671223 [ 47] 0x00007fdeeff34690 /opt/matlab2012a/bin/glnxa64/libmwm_interpreter.so+02102928 [ 48] 0x00007fdef0653063 /opt/matlab2012a/bin/glnxa64/libmwm_dispatcher.so+00479331 _ZN8Mfh_file11dispatch_fhEiPP11mxArray_tagiS2_+000515 [ 49] 0x00007fdeeff18476 /opt/matlab2012a/bin/glnxa64/libmwm_interpreter.so+01987702 [ 50] 0x00007fdeefea5d24 /opt/matlab2012a/bin/glnxa64/libmwm_interpreter.so+01518884 [ 51] 0x00007fdeefecd37e /opt/matlab2012a/bin/glnxa64/libmwm_interpreter.so+01680254 [ 52] 0x00007fdeefeca333 /opt/matlab2012a/bin/glnxa64/libmwm_interpreter.so+01667891 [ 53] 0x00007fdeefecb037 /opt/matlab2012a/bin/glnxa64/libmwm_interpreter.so+01671223 [ 54] 0x00007fdeeff34690 /opt/matlab2012a/bin/glnxa64/libmwm_interpreter.so+02102928 [ 55] 0x00007fdef0653063 /opt/matlab2012a/bin/glnxa64/libmwm_dispatcher.so+00479331 _ZN8Mfh_file11dispatch_fhEiPP11mxArray_tagiS2_+000515 [ 56] 0x00007fdeeff0553b /opt/matlab2012a/bin/glnxa64/libmwm_interpreter.so+01910075 [ 57] 0x00007fdeefec381c /opt/matlab2012a/bin/glnxa64/libmwm_interpreter.so+01640476 [ 58] 0x00007fdeefec049f /opt/matlab2012a/bin/glnxa64/libmwm_interpreter.so+01627295 [ 59] 0x00007fdeefec0bb5 /opt/matlab2012a/bin/glnxa64/libmwm_interpreter.so+01629109 [ 60] 0x00007fdeefebd990 /opt/matlab2012a/bin/glnxa64/libmwm_interpreter.so+01616272 [ 61] 0x00007fdeeb28b7cc /opt/matlab2012a/bin/glnxa64/libmwiqm.so+02828236 _ZNK3iqm18InternalEvalPlugin24inEvalCmdWithLocalReturnEPKcP15inWorkSpace_tag+000076 [ 62] 0x00007fdeeb28cd98 /opt/matlab2012a/bin/glnxa64/libmwiqm.so+02833816 _ZN3iqm18InternalEvalPlugin7executeEP15inWorkSpace_tagRN5boost10shared_ptrIN14cmddistributor17IIPCompletedEventEEE+000120 [ 63] 0x00007fdec8333094 /opt/matlab2012a/bin/glnxa64/libnativejmi.so+00704660 _ZN9nativejmi21JmiInternalEvalPlugin7executeEP15inWorkSpace_tagRN5boost10shared_ptrIN14cmddistributor17IIPCompletedEventEEE+000132 [ 64] 0x00007fdec8363be5 /opt/matlab2012a/bin/glnxa64/libnativejmi.so+00904165 _ZN3mcr3mvm27McrSwappingIqmPluginAdapterIN9nativejmi21JmiInternalEvalPluginEE7executeEP15inWorkSpace_tagRN5boost10shared_ptrIN14cmddistributor17IIPCompletedEventEEE+000629 [ 65] 0x00007fdeeb220482 /opt/matlab2012a/bin/glnxa64/libmwiqm.so+02389122 [ 66] 0x00007fdeeb211264 /opt/matlab2012a/bin/glnxa64/libmwiqm.so+02327140 [ 67] 0x00007fdef0c16afc /opt/matlab2012a/bin/glnxa64/libmwbridge.so+00125692 _Z10ioReadLinebP8_IO_FILEPcS1_iPbRKN5boost8optionalIKP15inWorkSpace_tagEEb+000508 [ 68] 0x00007fdef0c17165 /opt/matlab2012a/bin/glnxa64/libmwbridge.so+00127333 [ 69] 0x00007fdef0c1bd0a /opt/matlab2012a/bin/glnxa64/libmwbridge.so+00146698 [ 70] 0x00007fdef0c1c165 /opt/matlab2012a/bin/glnxa64/libmwbridge.so+00147813 [ 71] 0x00007fdef0c1c9ce /opt/matlab2012a/bin/glnxa64/libmwbridge.so+00149966 mnParser+000702 [ 72] 0x00007fdef098fde2 /opt/matlab2012a/bin/glnxa64/libmwmcr.so+01142242 _ZN11mcrInstance30mnParser_on_interpreter_threadEv+000034 [ 73] 0x00007fdef097251a /opt/matlab2012a/bin/glnxa64/libmwmcr.so+01021210 [ 74] 0x00007fdef0972598 /opt/matlab2012a/bin/glnxa64/libmwmcr.so+01021336 [ 75] 0x00007fdee72ed376 /opt/matlab2012a/bin/glnxa64/libmwuix.so+00463734 [ 76] 0x00007fdee72f7862 /opt/matlab2012a/bin/glnxa64/libmwuix.so+00505954 [ 77] 0x00007fdef12299a1 /opt/matlab2012a/bin/glnxa64/libmwservices.so+01366433 _ZSt8for_eachIN9__gnu_cxx17__normal_iteratorIPN5boost8weak_ptrIN4sysq10ws_ppeHookEEESt6vectorIS6_SaIS6_EEEENS4_8during_FIS6_NS2_10shared_ptrIS5_EEEEET0_T_SH_SG_+000081 [ 78] 0x00007fdef122aaab /opt/matlab2012a/bin/glnxa64/libmwservices.so+01370795 [ 79] 0x00007fdef12285f9 /opt/matlab2012a/bin/glnxa64/libmwservices.so+01361401 _Z25svWS_ProcessPendingEventsiib+000665 [ 80] 0x00007fdef097176f /opt/matlab2012a/bin/glnxa64/libmwmcr.so+01017711 [ 81] 0x00007fdef0971c3b /opt/matlab2012a/bin/glnxa64/libmwmcr.so+01018939 [ 82] 0x00007fdef0971d97 /opt/matlab2012a/bin/glnxa64/libmwmcr.so+01019287 [ 83] 0x0000003e458077f1 /lib64/libpthread.so.0+00030705 [ 84] 0x0000003e44ce570d /lib64/libc.so.6+00939789 clone+000109 This error was detected while a MEX-file was running. If the MEX-file is not an official MathWorks function, please examine its source code for errors. Please consult the External Interfaces Guide for information on debugging MEX-files. If this problem is reproducible, please submit a Service Request via: http://www.mathworks.com/support/contact_us/ A technical support engineer might contact you with further information. Thank you for your help.
Eelke Spaak - 2013-03-21 10:31:54 +0100
Same bug for nansum.mexa64
Eelke Spaak - 2013-03-21 10:35:41 +0100
For now, working around it by doing in my FT directory find ./ -iname "nan*.mexa64" -exec rm {} \; and relying on the fallback m-files.
Eelke Spaak - 2013-04-05 11:22:01 +0200
duplicate *** This bug has been marked as a duplicate of bug 2022 ***