Back to the main page.
Bug 2289 - Filters don't work when doing preprocessing
| Status | CLOSED INVALID |
| Reported | 2013-09-16 13:00:00 +0200 |
| Modified | 2019-08-10 12:03:57 +0200 |
| Product: | FieldTrip |
| Component: | preproc |
| Version: | unspecified |
| Hardware: | PC |
| Operating System: | Windows |
| Importance: | P3 normal |
| Assigned to: | |
| URL: | |
| Tags: | |
| Depends on: | |
| Blocks: | |
| See also: |
- 2013-09-16 13:00:37 +0200
When I do this the signal isn't filtererd cfg.preproc.demean = 'yes'; cfg.preproc.baselinewindow = [-0.2 0]; cfg.preproc.reref = 'yes'; cfg.preproc.refchannel = {'EEG'}; cfg.preproc.lpfilter = 'yes'; cfg.preproc.lpfreq = 30; % dataPE = ft_preprocessing(cfg); but when I remove the preproc part, it works but gives me a warning cfg.demean = 'yes'; cfg.baselinewindow = [-0.2 0]; cfg.reref = 'yes'; cfg.refchannel = {'EEG'}; cfg.lpfilter = 'yes'; cfg.lpfreq = 30; % dataPE = ft_preprocessing(cfg);
Robert Oostenveld - 2013-09-16 13:27:12 +0200
according to the documentation of ft_preprocessing your first cfg specification is not correct, but the second is. Your first specification is used in some functions (e.g. ft_timelockanalysis) that do some preprocessing as optional auxiliary step. What is the warning you get?
- 2013-09-16 14:29:07 +0200
I forgot to mention that I get the warning when I use ft_databrowser and not ft_preprocessing. Warning: The field cfg.reref is deprecated, please specify it as cfg.preproc.reref instead of cfg. > In ft_checkconfig at 445 In ft_databrowser at 124 Warning: The field cfg.refchannel is deprecated, please specify it as cfg.preproc.refchannel instead of cfg. > In ft_checkconfig at 445 In ft_databrowser at 124 Warning: The field cfg.demean is deprecated, please specify it as cfg.preproc.demean instead of cfg. > In ft_checkconfig at 445 In ft_databrowser at 124 Warning: The field cfg.baselinewindow is deprecated, please specify it as cfg.preproc.baselinewindow instead of cfg. > In ft_checkconfig at 445 In ft_databrowser at 124 Warning: The field cfg.dftfilter is deprecated, please specify it as cfg.preproc.dftfilter instead of cfg. > In ft_checkconfig at 445 In ft_databrowser at 124 Warning: The field cfg.dftfreq is deprecated, please specify it as cfg.preproc.dftfreq instead of cfg. > In ft_checkconfig at 445 In ft_databrowser at 124 Warning: The field cfg.hpfilter is deprecated, please specify it as cfg.preproc.hpfilter instead of cfg. > In ft_checkconfig at 445 In ft_databrowser at 124 Warning: The field cfg.hpfreq is deprecated, please specify it as cfg.preproc.hpfreq instead of cfg. > In ft_checkconfig at 445 In ft_databrowser at 124 Warning: The field cfg.lpfilter is deprecated, please specify it as cfg.preproc.lpfilter instead of cfg. > In ft_checkconfig at 445 In ft_databrowser at 124 Warning: The field cfg.lpfreq is deprecated, please specify it as cfg.preproc.lpfreq instead of cfg. > In ft_checkconfig at 445 In ft_databrowser at 124
Robert Oostenveld - 2013-09-16 14:50:13 +0200
(In reply to comment #2) in databrowser you should use cfg.preproc. So in short please use cfg.preproc everywhere, except for ft_preprocessing.