Back to the main page.
Bug 3282 - which fails as system command on windows for openmeeg
| Status |
NEW |
| Reported |
2017-04-13 15:01:00 +0200 |
| Modified |
2017-04-13 15:02:22 +0200 |
| Product: |
FieldTrip |
| Component: |
external |
| Version: |
unspecified |
| Hardware: |
PC |
| Operating System: |
Windows |
| Importance: |
P5 normal |
| Assigned to: |
Robert Oostenveld |
| URL: |
|
| Tags: |
|
| Depends on: |
|
| Blocks: |
|
| See also: |
http://bugzilla.fieldtriptoolbox.org/show_bug.cgi?id=2368 |
Marios Antonakakis - 2017-04-13 15:01:15 +0200
This is solved with the following change
function prefix = om_checkombin
% Check if OpenMEEG binaries are installed and work.
%
% Copyright (C) 2010-2017, OpenMEEG developers
% $LastChangedBy: alegra $
% $LastChangedDate: 2010-09-30 11:15:51 +0200 (Thu, 30 Sep 2010) $
% $Revision$
% start with an empty return value
prefix = '';
% check whether the binary is on the path
if ismac || isunix
[status, result] = system('which om_assemble');
if status>0
% which has failed
show_error(result);
end
% figure out where it is installed
openmeeg_bin = fileparts(result);
openmeeg_lib = fullfile(fileparts(openmeeg_bin), 'lib');
end
% check whether the binary can be executed
[status, result] = system('om_assemble');
% the failure might be due to the libraries not being found
if status>0
if ismac
prefix = ['export DYLD_LIBRARY_PATH=' openmeeg_lib ' && '];
[status, result] = system([prefix 'om_assemble']);
elseif isunix
prefix = ['export LD_LIBRARY_PATH=' openmeeg_lib ' && '];
[status, result] = system([prefix 'om_assemble']);
elseif ispc
% don't know how to determine this on Windows
show_error(result);
end
end
if status>0
show_error(result);
end
if nargout==0
clear prefix
end
function show_error(result)
disp('==============================================================================');
disp('OpenMEEG binaries are not correctly installed')
disp(' ')
disp('Visit the OpenMEEG website for instructions')
disp('http://openmeeg.github.io/')
disp(' ')
disp('See also the installation instructions on')
disp('http://www.fieldtriptoolbox.org/faq/how_do_i_install_the_openmeeg_binaries')
disp('==============================================================================');
disp(result);
error('OpenMEEG not found')