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Bug 6 - add cfg.inputfile and cfg.outputfile to all fieldtrip functions
| Status | CLOSED FIXED |
| Reported | 2010-01-07 11:54:00 +0100 |
| Modified | 2010-07-01 14:08:08 +0200 |
| Product: | FieldTrip |
| Component: | core |
| Version: | unspecified |
| Hardware: | PC |
| Operating System: | Mac OS |
| Importance: | P5 enhancement |
| Assigned to: | Tim Engelkes |
| URL: | |
| Tags: | |
| Depends on: | |
| Blocks: | |
| See also: |
Robert Oostenveld - 2010-01-07 11:54:39 +0100
Most functions work like this argout = funname(cfg, argin) it would be nice to be able to specify cfg.inputfile and cfg.outputfile instead of argin and argout, so that one could do funname(cfg) which would also read and write to disk
Robert Oostenveld - 2010-04-29 16:53:34 +0200
has been done for preprocessing
Robert Oostenveld - 2010-04-29 17:01:05 +0200
The following functions in fieldtrip/*.m use the nargin command and probably have variable number of input arguments roboos@mentat001> grep -l nargin *.m ft_appenddata.m ft_artifact_clip.m ft_artifact_ecg.m ft_artifact_eog.m ft_artifact_jump.m ft_artifact_muscle.m ft_artifact_threshold.m ft_artifact_zvalue.m ft_channelcombination.m ft_connectivityanalysis.m ft_databrowser.m ft_freqanalysis.m ft_headmodelplot.m ft_layoutplot.m ft_multiplotER.m ft_prepare_bemmodel.m ft_prepare_layout.m ft_prepare_leadfield.m ft_prepare_localspheres.m ft_prepare_mesh.m ft_prepare_singleshell.m ft_preprocessing.m ft_recodeevent.m ft_rejectartifact.m ft_rejectcomponent.m ft_singleplotER.m ft_sourceanalysis.m ft_sourcedescriptives.m ft_volumerealign.m sourcestatistics_randomization.m surfaceplot.m topoplot.m
Robert Oostenveld - 2010-04-29 17:02:25 +0200
(In reply to comment #2) you should also check on the presence of varargin
Robert Oostenveld - 2010-04-29 17:12:21 +0200
the following would make cfg.inputfile robust against the name of the variable in the file var = whos('-file', filename); if length(var)==1 % read the one variable in the file, regardless of how it is called tmp = load(filename); data = tmp.(var.name); clear tmp else % if multiple variables are present, then one of them MUST be called data load(filename, 'data'); end